dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04396
Location and strand information: 18257 - 21565 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04397
Location and strand information: 21580 - 23796 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04398
Location and strand information: 24699 - 28139 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04399
Location and strand information: 28163 - 30130 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04400
Location and strand information: 30389 - 31135 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04401
Location and strand information: 31281 - 33020 (+)
Family: PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5079
Protein molecular weight: 64850.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04402
Location and strand information: 33079 - 33747 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04403
Location and strand information: 33784 - 33921 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04404
Location and strand information: 33927 - 34853 (+)
Family: GH43_18|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1716
Protein molecular weight: 35236.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04405
Location and strand information: 34877 - 38197 (+)
Family: GH143|GH142
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1875
Protein molecular weight: 127190.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04406
Location and strand information: 38326 - 41178 (+)
Family: GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.974
Protein molecular weight: 108238.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04407
Location and strand information: 41400 - 42734 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2193
Protein molecular weight: 49403.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04408
Location and strand information: 42764 - 44731 (+)
Family: CE0|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8901
Protein molecular weight: 73803.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04409
Location and strand information: 44937 - 45734 (+)
Family: null
Protein type: null
Protein description: putative NTE family protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04410
Location and strand information: 45727 - 45873 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04411
Location and strand information: 45986 - 49846 (-)
Family: GH33|GH78|CBM67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1761
Protein molecular weight: 145443.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04412
Location and strand information: 49870 - 51336 (-)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5657
Protein molecular weight: 56864.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04413
Location and strand information: 51362 - 52573 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 5.5513
Protein molecular weight: 45967.09
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_424|CGC2
Gene ID: MGYG000003252_04414
Location and strand information: 52587 - 55055 (-)
Family: GH95|CBM2|CBM13
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5466
Protein molecular weight: 92763.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003252_04401	PL1_e27
MGYG000003252_04404	GH43_e130\|3.2.1.55	xylan
MGYG000003252_04405	GH143_e0\|GH142_e0
MGYG000003252_04406	GH78_e41\|3.2.1.40	alpha-rhamnoside
MGYG000003252_04407	GH28_e11
MGYG000003252_04408	CE0_e11
MGYG000003252_04411	GH78_e32\|GH33_e8\|CBM67_e6\|3.2.1.40\|3.2.1.-	pectin\|alpha-rhamnoside
MGYG000003252_04412	GH140_e1\|3.2.1.-	pectin
MGYG000003252_04413	GH105_e23\|3.2.1.-	pectin
MGYG000003252_04414	GH95_e0\|CBM2_e92\|CBM13_e181\|3.2.1.-	xylan\|pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003252_04396	TonB-dependent receptor SusC	TC	18257	21565	+	1.B.14.6.2
MGYG000003252_04397	hypothetical protein	null	21580	23796	+	SusD-like_3\| SusD_RagB
MGYG000003252_04398	hypothetical protein	TC	24699	28139	+	1.B.14.6.1
MGYG000003252_04399	hypothetical protein	null	28163	30130	+	SusD-like_3\| SusD_RagB
MGYG000003252_04400	hypothetical protein	null	30389	31135	+	HAD_SAK_2
MGYG000003252_04401	hypothetical protein	CAZyme	31281	33020	+	PL1_2\| PL1
MGYG000003252_04402	hypothetical protein	null	33079	33747	+	DUF3826
MGYG000003252_04403	hypothetical protein	null	33784	33921	+	No domain
MGYG000003252_04404	hypothetical protein	CAZyme	33927	34853	+	GH43_18\| GH43
MGYG000003252_04405	hypothetical protein	CAZyme	34877	38197	+	GH143\| GH142
MGYG000003252_04406	hypothetical protein	CAZyme	38326	41178	+	GH78\| CBM67
MGYG000003252_04407	hypothetical protein	CAZyme	41400	42734	+	GH28
MGYG000003252_04408	hypothetical protein	CAZyme	42764	44731	+	CE0\| CE19
MGYG000003252_04409	putative NTE family protein	null	44937	45734	+	Patatin
MGYG000003252_04410	hypothetical protein	null	45727	45873	-	No domain
MGYG000003252_04411	hypothetical protein	CAZyme	45986	49846	-	GH33\| GH78\| CBM67
MGYG000003252_04412	hypothetical protein	CAZyme	49870	51336	-	GH140
MGYG000003252_04413	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	51362	52573	-	GH105
MGYG000003252_04414	hypothetical protein	CAZyme	52587	55055	-	GH95\| CBM2\| CBM13
Protein ID	Protein Name	Type	Start	End	Strand	Signature